Supplementary data for STEP-BD and UCL genome-wide association
analysis of bipolar disorder
This site contains data from the study published in:
Sklar et al (2008) Whole-genome association study of bipolar disorder.
Mol Psych.
The two main files are in PLINK format and can be viewed with
the latest version of HaploView
that provides functions to tabulate, filter and plot PLINK result files.
Case and control allele frequencies and basic association
test: assoc.zip (please e-mail for access)
(described here)
Primary analysis: single SNP association using Cochran-Mantel-Haenszel
test: cmh.zip (please e-mail for access)
(described here)
A list of positions (SNP, chromosome, base-pair position): pos.zip
List of SNPs on negative strand: strand.zip
(a list of negative strand SNPs, i.e. all others are on the plus
strand).
For general questions regarding the study, and/or access to these data, the corresponding author is
Pamela Sklar sklar@chgr.mgh.harvard.edu
For technical questions, please also CC
Shaun Purcell shaun@pngu.mgh.harvard.edu